Publications

You can also find a list of our publications on HAL

2023

Ben Abdelkrim A, Ithurbide M, Larsen T, Schmidely P, Friggens NC. Milk metabolites can characterise individual differences in animal resilience to a nutritional challenge in lactating dairy goats. Animal. 2023;17(4):100727. doi:10.1016/j.animal.2023.100727.
Antonios S, Legarra A, Pong-Wong R, Astruc JM, Rodríguez-Ramilo ST, Vitezica ZG. Partitioning of the genetic trends of French dairy sheep in Mendelian samplings and long-term contributions. J Dairy Sci. 2023. doi:10.3168/jds.2022-23009.
Boitard S, Liaubet L, Paris C, et al. Whole-genome sequencing of cryopreserved resources from French Large White pigs at two distinct sampling times reveals strong signatures of convergent and divergent selection between the dam and sire lines. Genet Sel Evol. 2023;55(1):13. doi:10.1186/s12711-023-00789-z.
Jourdain J, Barasc H, Faraut T, et al. Large-scale detection and characterization of inter-chromosomal rearrangements in normozoospermic bulls using massive genotype and phenotype data sets. Genome Res. 2023. doi:10.1101/gr.277787.123.
Mussard E, Lencina C, Boudry G, et al. Culture of Piglet Intestinal 3D Organoids from Cryopreserved Epithelial Crypts and Establishment of Cell Monolayers. J Vis Exp. 2023;(192). doi:10.3791/64917.
Beaumont M, Lencina C, Bertide A, et al. The Early Life Microbiota Is Not a Major Factor Underlying the Susceptibility to Postweaning Diarrhea in Piglets. Microbiol Spectr. 2023:e0069423. doi:10.1128/spectrum.00694-23.
Hoellinger T, Mestre C, Aschard H, et al. Enhancer/gene relationships: Need for more reliable genome-wide reference sets. Front Bioinform. 2023;3:1092853. doi:10.3389/fbinf.2023.1092853.
G Boggio M, Christensen OF, Legarra A, Meynadier A, Marie-Etancelin C. Microbiability of milk composition and genetic control of microbiota effects in sheep. J Dairy Sci. 2023. doi:10.3168/jds.2022-22948.
Guerbette T, Beaumont M, Andriamihaja M, et al. Obesogenic diet leads to luminal overproduction of the complex IV inhibitor H S and mitochondrial dysfunction in mouse colonocytes. FASEB J. 2023;37(4):e22853. doi:10.1096/fj.202201971R.
Bussiman F, Chen C-Y, Holl J, et al. Boundaries for genotype, phenotype, and pedigree truncation in genomic evaluations in pigs. J Anim Sci. 2023. doi:10.1093/jas/skad273.
Boggio GMartinez, Marie-Etancelin C, Menras J-M, et al. A large database linking the rumen bacterial composition and milk traits in Lacaune sheep. Sci Data. 2023;10(1):17. doi:10.1038/s41597-022-01912-3.
Cisse S, Bahut M, Marais C, et al. Fine characterization and microbiota assessment as keys to understanding the positive effect of standardized natural citrus extract on broiler chickens. J Anim Sci. 2023;101. doi:10.1093/jas/skad069.
Hakimzadeh A, Asbun AAbdala, Albanese D, et al. A pile of pipelines: An overview of the bioinformatics software for metabarcoding data analyses. Mol Ecol Resour. 2023. doi:10.1111/1755-0998.13847.
Meynadier A, Marie-Etancelin C, Palevich N. Editorial: Host genome and metagenome interactions for improved ruminant health and performance. Front Microbiol. 2023;14:1160074. doi:10.3389/fmicb.2023.1160074.
Tırınk C, Önder H, François D, et al. Comparison of the data mining and machine learning algorithms for predicting the final body weight for Romane sheep breed. PLoS One. 2023;18(8):e0289348. doi:10.1371/journal.pone.0289348.
Talebi R, Ghaffari MReza, Fabre S, Mardi M, Alamouti MKazemi. Comparison of the growth performance between pure Moghani sheep and crosses with Texel or Booroola sheep carrying major genes contributing to muscularity and prolificacy. Anim Biotechnol. 2023:1-12. doi:10.1080/10495398.2023.2165933.
Parejo M, Talenti A, Richardson M, Vignal A, Barnett M, Wragg D. AmelHap: Leveraging drone whole-genome sequence data to create a honey bee HapMap. Sci Data. 2023;10(1):198. doi:10.1038/s41597-023-02097-z.
Ben-Jemaa S, Adam G, Boussaha M, et al. Whole genome sequencing reveals signals of adaptive admixture in Creole cattle. Sci Rep. 2023;13(1):12155. doi:10.1038/s41598-023-38774-7.
Garcia A, Aguilar I, Legarra A, Tsuruta S, Misztal I, Lourenco D. Correction: Theoretical accuracy for indirect predictions based on SNP effects from single-step GBLUP. Genet Sel Evol. 2023;55(1):26. doi:10.1186/s12711-023-00799-x.
Wientjes YCJ, Bijma P, van den Heuvel J, Zwaan BJ, Vitezica ZG, Calus MPL. The long-term effects of genomic selection: 2. Changes in allele frequencies of causal loci and new mutations. Genetics. 2023. doi:10.1093/genetics/iyad141.
Gmel AImogen, Guichard M, Dainat B, et al. Identification of runs of homozygosity in Western honey bees () using whole-genome sequencing data. Ecol Evol. 2023;13(1):e9723. doi:10.1002/ece3.9723.
Liaubet L, Guilmineau C, Lefort G, et al. Plasma H-NMR metabolic and amino acid profiles of newborn piglets from two lines divergently selected for residual feed intake. Sci Rep. 2023;13(1):7127. doi:10.1038/s41598-023-34279-5.
Shang H, Field DL, Paun O, et al. Drivers of genomic landscapes of differentiation across a Populus divergence gradient. Mol Ecol. 2023;32(15):4348-4361. doi:10.1111/mec.17034.
Bermann M, Aguilar I, Lourenco D, Misztal I, Legarra A. Reliabilities of estimated breeding values in models with metafounders. Genet Sel Evol. 2023;55(1):6. doi:10.1186/s12711-023-00778-2.
Fouikar SEl, Duranthon V, Helies V, et al. Multigenerational Effects of a Complex Human-Relevant Exposure during Folliculogenesis and Preimplantation Embryo Development: The FEDEXPO Study. Toxics. 2023;11(5). doi:10.3390/toxics11050425.
Déserts ADanguy des, Durand N, Servin B, et al. Comparison of genomic-enabled cross selection criteria for the improvement of inbred line breeding populations. G3 (Bethesda). 2023. doi:10.1093/g3journal/jkad195.
Le Graverand Q, Marie-Etancelin C, Meynadier A, Weisbecker J-L, Marcon D, Tortereau F. Predicting feed efficiency traits in growing lambs from their ruminal microbiota. Animal. 2023;17(6):100824. doi:10.1016/j.animal.2023.100824.
Muráni E, Gilbert H, Rauw WM. Editorial: Genotype-by-environment interaction in farm animals: from measuring to understanding. Front Genet. 2023;14:1267334. doi:10.3389/fgene.2023.1267334.
Parey E, Louis A, Montfort J, et al. Genome structures resolve the early diversification of teleost fishes. Science. 2023;379(6632):572-575. doi:10.1126/science.abq4257.
Herry F, Hérault F, Lecerf F, et al. Restriction site-associated DNA sequencing technologies as an alternative to low-density SNP chips for genomic selection: a simulation study in layer chickens. BMC Genomics. 2023;24(1):271. doi:10.1186/s12864-023-09321-5.

Pages