Publications

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2023

Hewett AM, Stoffel MA, Peters L, Johnston SE, Pemberton JM. Selection, recombination and population history effects on runs of homozygosity (ROH) in wild red deer (Cervus elaphus). Heredity (Edinb). 2023. doi:10.1038/s41437-023-00602-z.
Ben Abdelkrim A, Ithurbide M, Larsen T, Schmidely P, Friggens NC. Milk metabolites can characterise individual differences in animal resilience to a nutritional challenge in lactating dairy goats. Animal. 2023;17(4):100727. doi:10.1016/j.animal.2023.100727.
Boitard S, Liaubet L, Paris C, et al. Whole-genome sequencing of cryopreserved resources from French Large White pigs at two distinct sampling times reveals strong signatures of convergent and divergent selection between the dam and sire lines. Genet Sel Evol. 2023;55(1):13. doi:10.1186/s12711-023-00789-z.
Mussard E, Lencina C, Boudry G, et al. Culture of Piglet Intestinal 3D Organoids from Cryopreserved Epithelial Crypts and Establishment of Cell Monolayers. J Vis Exp. 2023;(192). doi:10.3791/64917.
Hoellinger T, Mestre C, Aschard H, et al. Enhancer/gene relationships: Need for more reliable genome-wide reference sets. Front Bioinform. 2023;3:1092853. doi:10.3389/fbinf.2023.1092853.
Boggio GMartinez, Marie-Etancelin C, Menras J-M, et al. A large database linking the rumen bacterial composition and milk traits in Lacaune sheep. Sci Data. 2023;10(1):17. doi:10.1038/s41597-022-01912-3.
Talebi R, Ghaffari MReza, Fabre S, Mardi M, Alamouti MKazemi. Comparison of the growth performance between pure Moghani sheep and crosses with Texel or Booroola sheep carrying major genes contributing to muscularity and prolificacy. Anim Biotechnol. 2023:1-12. doi:10.1080/10495398.2023.2165933.
Gmel AImogen, Guichard M, Dainat B, et al. Identification of runs of homozygosity in Western honey bees () using whole-genome sequencing data. Ecol Evol. 2023;13(1):e9723. doi:10.1002/ece3.9723.
Bermann M, Aguilar I, Lourenco D, Misztal I, Legarra A. Reliabilities of estimated breeding values in models with metafounders. Genet Sel Evol. 2023;55(1):6. doi:10.1186/s12711-023-00778-2.
Parey E, Louis A, Montfort J, et al. Genome structures resolve the early diversification of teleost fishes. Science. 2023;379(6632):572-575. doi:10.1126/science.abq4257.
Steyn Y, Lawlor T, Masuda Y, et al. Nonparallel genome changes within subpopulations over time contributed to genetic diversity within the US Holstein population. J Dairy Sci. 2023. doi:10.3168/jds.2022-21914.
Fetiveau M, Savietto D, Fillon V, Bannelier C, Pujol S, Fortun-Lamothe L. Effect of outdoor grazing-area access time and enrichment on space and pasture use, behaviour, health and growth traits of weaned rabbits. Animal. 2023;17(3):100724. doi:10.1016/j.animal.2023.100724.

2022

Drouilhet L, Moreno C, Plisson-Petit F, Marcon D, Fabre S, Hazard D. Variability in Global DNA Methylation Rate Across Tissues and Over Time in Sheep. Front Genet. 2022;13:791283. doi:10.3389/fgene.2022.791283.
Secula A, Chapuis H, Collin A, et al. Maternal dietary methionine restriction alters the expression of energy metabolism genes in the duckling liver. BMC Genomics. 2022;23(1):407. doi:10.1186/s12864-022-08634-1.
Fresco S, Marie-Etancelin C, Meynadier A, Boggio GMartinez. Variation in Rumen Bacteria of Lacaune Dairy Ewes From One Week to the Next. Front Microbiol. 2022;13:848518. doi:10.3389/fmicb.2022.848518.
Andrieux C, Marchand M, Larroquet L, et al. Fasting/refeeding: an experimental model to study the impact of early thermal manipulation on hepatic metabolism in mule ducks. Am J Physiol Regul Integr Comp Physiol. 2022. doi:10.1152/ajpregu.00158.2022.
Bouquet A, Déru V, Blanchet B, et al. Digestive efficiency traits in growing pigs are genetically correlated with sow litter traits in the Large White breed. Animal. 2022;16(2):100447. doi:10.1016/j.animal.2021.100447.
Aliakbari A, Zemb O, Cauquil L, Barilly C, Billon Y, Gilbert H. Microbiability and microbiome-wide association analyses of feed efficiency and performance traits in pigs. Genet Sel Evol. 2022;54(1):29. doi:10.1186/s12711-022-00717-7.
Lenoir G, Flatres-Grall L, Friggens NC, David I. Robustness scores in fattening pigs based on routinely collected phenotypes: determination and genetic parameters. J Anim Sci. 2022;100(5). doi:10.1093/jas/skac157.
Larsen T, Rupp R, Friggens NC, Pires JAA. Fluorometric determination of isocitrate dehydrogenase (EC 1.1.1.42; 1; NADP dependent) in ruminant milk. Animal. 2022;16(8):100593. doi:10.1016/j.animal.2022.100593.
García-Baccino CA, Pineda-Quiroga C, Astruc JM, Ugarte E, Legarra A. High genetic correlation for milk yield across Manech and Latxa dairy sheep from France and Spain. JDS Commun. 2022;3(4):260-264. doi:10.3168/jdsc.2021-0195.
Legarra A, González-Diéguez D, Vitezica ZG. Computing strategies for multi-population genomic evaluation. Genet Sel Evol. 2022;54(1):10. doi:10.1186/s12711-022-00705-x.
Varona L, Legarra A, Toro MA, Vitezica ZG. Genomic Prediction Methods Accounting for Nonadditive Genetic Effects. Methods Mol Biol. 2022;2467:219-243. doi:10.1007/978-1-0716-2205-6_8.
Wragg D, Eynard SE, Basso B, et al. Complex population structure and haplotype patterns in the Western European honey bee from sequencing a large panel of haploid drones. Mol Ecol Resour. 2022. doi:10.1111/1755-0998.13665.
Bai B, A Degen A, Han X, et al. Average Daily Gain and Energy and Nitrogen Requirements of 4-Month-Old Female Yak Calves. Front Vet Sci. 2022;9:906440. doi:10.3389/fvets.2022.906440.
Manzocchi E, Ferlay A, Farizon Y, et al. Herbage utilisation method affects rumen fluid and milk fatty acid profile in Holstein and Montbéliarde cows. Animal. 2022;16(12):100674. doi:10.1016/j.animal.2022.100674.
Moskaliuk VS, Kozhemyakina RV, Bazovkina DV, et al. On an association between fear-induced aggression and striatal-enriched protein tyrosine phosphatase (STEP) in the brain of Norway rats. Biomed Pharmacother. 2022;147:112667. doi:10.1016/j.biopha.2022.112667.
Elsen J-M. Genomic Prediction of Complex Traits, Principles, Overview of Factors Affecting the Reliability of Genomic Prediction, and Algebra of the Reliability. Methods Mol Biol. 2022;2467:45-76. doi:10.1007/978-1-0716-2205-6_2.
Le Floc'h N, Achard CStéphanie, Eugenio FAmann, Apper E, Combes S, Quesnel H. Effect of live yeast supplementation in sow diet during gestation and lactation on sow and piglet fecal microbiota, health and performance. J Anim Sci. 2022. doi:10.1093/jas/skac209.
Mary N, Iannuccelli N, Petit G, et al. Genome-wide analysis of hybridization in wild boar populations reveals adaptive introgression from domestic pig. Evol Appl. 2022;15(7):1115-1128. doi:10.1111/eva.13432.

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