Publications

You can also find a list of our publications on HAL

2023

Rougemont Q, Leroy T, Rondeau EB, Koop B, Bernatchez L. Allele surfing causes maladaptation in a Pacific salmon of conservation concern. PLoS Genet. 2023;19(9):e1010918. doi:10.1371/journal.pgen.1010918.
Parey E, Louis A, Montfort J, et al. Genome structures resolve the early diversification of teleost fishes. Science. 2023;379(6632):572-575. doi:10.1126/science.abq4257.
Ithurbide M, Wang H, Fassier T, et al. Multivariate analysis of milk metabolite measures shows potential for deriving new resilience phenotypes. J Dairy Sci. 2023. doi:10.3168/jds.2023-23332.
Beaumont M, Lencina C, Feve K, et al. Disruption of the primocolonizing microbiota alters epithelial homeostasis and imprints stem cells in the colon of neonatal piglets. FASEB J. 2023;37(10):e23149. doi:10.1096/fj.202301182R.
Steyn Y, Lawlor T, Masuda Y, et al. Nonparallel genome changes within subpopulations over time contributed to genetic diversity within the US Holstein population. J Dairy Sci. 2023. doi:10.3168/jds.2022-21914.
Macé T, González-García E, Kövér G, Hazard D, Taghipoor M. PhenoBR: a model to phenotype body condition dynamics in meat sheep. Animal. 2023;17(6):100845. doi:10.1016/j.animal.2023.100845.
David I, Ricard A. An improved transmissibility model to detect transgenerational transmitted environmental effects. Genet Sel Evol. 2023;55(1):66. doi:10.1186/s12711-023-00833-y.

2022

Macedo FL, Astruc JM, Meuwissen THE, Legarra A. Removing data and using metafounders alleviates biases for all traits in Lacaune dairy sheep predictions. J Dairy Sci. 2022. doi:10.3168/jds.2021-20860.
Cerutti C, Leroux S, Gourichon D, et al. Short communication: Effects of in-ovo injection of endocrine disruptors and methyltransferase inhibitor on quail growth and egg-laying performances. Animal. 2022;16(3):100464. doi:10.1016/j.animal.2022.100464.
Macé T, González-García E, Foulquié D, et al. Genome-wide analyses reveal a strong association between LEPR gene variants and body fat reserves in ewes. BMC Genomics. 2022;23(1):412. doi:10.1186/s12864-022-08636-z.
Eynard SE, Vignal A, Basso B, et al. Reconstructing queen genotypes by pool sequencing colonies in eusocial insects: statistical methods and their application to honeybee. Mol Ecol Resour. 2022. doi:10.1111/1755-0998.13685.
Besnard F, Leclerc H, Boussaha M, et al. Detailed analysis of mortality rates in the female progeny of 1,001 Holstein bulls allows the discovery of new dominant genetic defects. J Dairy Sci. 2022. doi:10.3168/jds.2022-22365.
Drouilhet L, Moreno C, Plisson-Petit F, Marcon D, Fabre S, Hazard D. Variability in Global DNA Methylation Rate Across Tissues and Over Time in Sheep. Front Genet. 2022;13:791283. doi:10.3389/fgene.2022.791283.
Secula A, Chapuis H, Collin A, et al. Maternal dietary methionine restriction alters the expression of energy metabolism genes in the duckling liver. BMC Genomics. 2022;23(1):407. doi:10.1186/s12864-022-08634-1.
Fresco S, Marie-Etancelin C, Meynadier A, Boggio GMartinez. Variation in Rumen Bacteria of Lacaune Dairy Ewes From One Week to the Next. Front Microbiol. 2022;13:848518. doi:10.3389/fmicb.2022.848518.
Andrieux C, Marchand M, Larroquet L, et al. Fasting/refeeding: an experimental model to study the impact of early thermal manipulation on hepatic metabolism in mule ducks. Am J Physiol Regul Integr Comp Physiol. 2022. doi:10.1152/ajpregu.00158.2022.
Bouquet A, Déru V, Blanchet B, et al. Digestive efficiency traits in growing pigs are genetically correlated with sow litter traits in the Large White breed. Animal. 2022;16(2):100447. doi:10.1016/j.animal.2021.100447.
Aliakbari A, Zemb O, Cauquil L, Barilly C, Billon Y, Gilbert H. Microbiability and microbiome-wide association analyses of feed efficiency and performance traits in pigs. Genet Sel Evol. 2022;54(1):29. doi:10.1186/s12711-022-00717-7.
Lenoir G, Flatres-Grall L, Friggens NC, David I. Robustness scores in fattening pigs based on routinely collected phenotypes: determination and genetic parameters. J Anim Sci. 2022;100(5). doi:10.1093/jas/skac157.
Larsen T, Rupp R, Friggens NC, Pires JAA. Fluorometric determination of isocitrate dehydrogenase (EC 1.1.1.42; 1; NADP dependent) in ruminant milk. Animal. 2022;16(8):100593. doi:10.1016/j.animal.2022.100593.
García-Baccino CA, Pineda-Quiroga C, Astruc JM, Ugarte E, Legarra A. High genetic correlation for milk yield across Manech and Latxa dairy sheep from France and Spain. JDS Commun. 2022;3(4):260-264. doi:10.3168/jdsc.2021-0195.
Legarra A, González-Diéguez D, Vitezica ZG. Computing strategies for multi-population genomic evaluation. Genet Sel Evol. 2022;54(1):10. doi:10.1186/s12711-022-00705-x.
Varona L, Legarra A, Toro MA, Vitezica ZG. Genomic Prediction Methods Accounting for Nonadditive Genetic Effects. Methods Mol Biol. 2022;2467:219-243. doi:10.1007/978-1-0716-2205-6_8.
Wragg D, Eynard SE, Basso B, et al. Complex population structure and haplotype patterns in the Western European honey bee from sequencing a large panel of haploid drones. Mol Ecol Resour. 2022. doi:10.1111/1755-0998.13665.
Bai B, A Degen A, Han X, et al. Average Daily Gain and Energy and Nitrogen Requirements of 4-Month-Old Female Yak Calves. Front Vet Sci. 2022;9:906440. doi:10.3389/fvets.2022.906440.
Manzocchi E, Ferlay A, Farizon Y, et al. Herbage utilisation method affects rumen fluid and milk fatty acid profile in Holstein and Montbéliarde cows. Animal. 2022;16(12):100674. doi:10.1016/j.animal.2022.100674.
Moskaliuk VS, Kozhemyakina RV, Bazovkina DV, et al. On an association between fear-induced aggression and striatal-enriched protein tyrosine phosphatase (STEP) in the brain of Norway rats. Biomed Pharmacother. 2022;147:112667. doi:10.1016/j.biopha.2022.112667.
Elsen J-M. Genomic Prediction of Complex Traits, Principles, Overview of Factors Affecting the Reliability of Genomic Prediction, and Algebra of the Reliability. Methods Mol Biol. 2022;2467:45-76. doi:10.1007/978-1-0716-2205-6_2.
Le Floc'h N, Achard CStéphanie, Eugenio FAmann, Apper E, Combes S, Quesnel H. Effect of live yeast supplementation in sow diet during gestation and lactation on sow and piglet fecal microbiota, health and performance. J Anim Sci. 2022. doi:10.1093/jas/skac209.
Mary N, Iannuccelli N, Petit G, et al. Genome-wide analysis of hybridization in wild boar populations reveals adaptive introgression from domestic pig. Evol Appl. 2022;15(7):1115-1128. doi:10.1111/eva.13432.

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