Publications

You can also find a list of our publications on HAL

2023

Antonios S, Legarra A, Pong-Wong R, Astruc JM, Rodríguez-Ramilo ST, Vitezica ZG. Partitioning of the genetic trends of French dairy sheep in Mendelian samplings and long-term contributions. J Dairy Sci. 2023. doi:10.3168/jds.2022-23009.
Carvalho AVitorino, Hennequet-Antier C, Rouger R, et al. Thermal conditioning of quail embryos has transgenerational and reversible long-term effects. J Anim Sci Biotechnol. 2023;14(1):124. doi:10.1186/s40104-023-00924-2.
Boitard S, Liaubet L, Paris C, et al. Whole-genome sequencing of cryopreserved resources from French Large White pigs at two distinct sampling times reveals strong signatures of convergent and divergent selection between the dam and sire lines. Genet Sel Evol. 2023;55(1):13. doi:10.1186/s12711-023-00789-z.
Jourdain J, Barasc H, Faraut T, et al. Large-scale detection and characterization of inter-chromosomal rearrangements in normozoospermic bulls using massive genotype and phenotype data sets. Genome Res. 2023. doi:10.1101/gr.277787.123.
Leroy T. Re-evaluating the driving force behind mutations. Elife. 2023;12. doi:10.7554/eLife.89706.
Mussard E, Lencina C, Boudry G, et al. Culture of Piglet Intestinal 3D Organoids from Cryopreserved Epithelial Crypts and Establishment of Cell Monolayers. J Vis Exp. 2023;(192). doi:10.3791/64917.
Beaumont M, Lencina C, Bertide A, et al. The Early Life Microbiota Is Not a Major Factor Underlying the Susceptibility to Postweaning Diarrhea in Piglets. Microbiol Spectr. 2023:e0069423. doi:10.1128/spectrum.00694-23.
Faux P, Ding L, Ramirez-Aristeguieta LMiguel, et al. Neanderthal introgression in SCN9A impacts mechanical pain sensitivity. Commun Biol. 2023;6(1):958. doi:10.1038/s42003-023-05286-z.
Hoellinger T, Mestre C, Aschard H, et al. Enhancer/gene relationships: Need for more reliable genome-wide reference sets. Front Bioinform. 2023;3:1092853. doi:10.3389/fbinf.2023.1092853.
G Boggio M, Christensen OF, Legarra A, Meynadier A, Marie-Etancelin C. Microbiability of milk composition and genetic control of microbiota effects in sheep. J Dairy Sci. 2023. doi:10.3168/jds.2022-22948.
Paganini J, Faux P, Beley S, Picard C, Chiaroni J, Di Cristofaro J. HLA-F transcriptional and protein differential expression according to its genetic polymorphisms. HLA. 2023;102(5):578-589. doi:10.1111/tan.15087.
Guerbette T, Beaumont M, Andriamihaja M, et al. Obesogenic diet leads to luminal overproduction of the complex IV inhibitor H S and mitochondrial dysfunction in mouse colonocytes. FASEB J. 2023;37(4):e22853. doi:10.1096/fj.202201971R.
Bussiman F, Chen C-Y, Holl J, et al. Boundaries for genotype, phenotype, and pedigree truncation in genomic evaluations in pigs. J Anim Sci. 2023. doi:10.1093/jas/skad273.
Amiri S, Puillet L, Huau C, Fassier T, Rupp R, Friggens NC. Analysis of reproduction success, growth and milk trajectories and response to nutritional challenge in two Alpine goat lines selected on divergent longevity. Animal. 2023;17(11):101004. doi:10.1016/j.animal.2023.101004.
Cisse S, Bahut M, Marais C, et al. Fine characterization and microbiota assessment as keys to understanding the positive effect of standardized natural citrus extract on broiler chickens. J Anim Sci. 2023;101. doi:10.1093/jas/skad069.
Hakimzadeh A, Asbun AAbdala, Albanese D, et al. A pile of pipelines: An overview of the bioinformatics software for metabarcoding data analyses. Mol Ecol Resour. 2023. doi:10.1111/1755-0998.13847.
Lenoir G, Flatres-Grall L, Muñoz-Tamayo R, David I, Friggens NC. Disentangling the dynamics of energy allocation to develop a proxy for robustness of fattening pigs. Genet Sel Evol. 2023;55(1):77. doi:10.1186/s12711-023-00851-w.

2022

Mucha S, Tortereau F, Doeschl-Wilson A, Rupp R, Conington J. Animal Board Invited Review: Meta-analysis of genetic parameters for resilience and efficiency traits in goats and sheep. Animal. 2022;16(3):100456. doi:10.1016/j.animal.2022.100456.
Bedere N, Berghof TVL, Peeters K, et al. Using egg production longitudinal recording to study the genetic background of resilience in purebred and crossbred laying hens. Genet Sel Evol. 2022;54(1):26. doi:10.1186/s12711-022-00716-8.
Gervais L, Morellet N, David I, et al. Quantifying heritability and estimating evolutionary potential in the wild when individuals that share genes also share environments. J Anim Ecol. 2022;91(6):1239-1250. doi:10.1111/1365-2656.13677.
McWhorter TM, Bermann M, Garcia ALS, et al. Implication of the order of blending and tuning when computing the genomic relationship matrix in single-step GBLUP. J Anim Breed Genet. 2022. doi:10.1111/jbg.12734.
Allaoua M, Bonnafé E, Etienne P, et al. A carvacrol-based product reduces Campylobacter jejuni load and alters microbiota composition in the caeca of chickens. J Appl Microbiol. 2022. doi:10.1111/jam.15521.
Demars J, Labrune Y, Iannuccelli N, et al. A genome-wide epistatic network underlies the molecular architecture of continuous color variation of body extremities. Genomics. 2022;114(3):110361. doi:10.1016/j.ygeno.2022.110361.
Fouchécourt S, Fillon V, Marrauld C, et al. Expanding duplication of the testis PHD Finger Protein 7 (PHF7) gene in the chicken genome. Genomics. 2022:110411. doi:10.1016/j.ygeno.2022.110411.
Iannuccelli N, Sarry J, Billon Y, et al. Rabbit targeted genomic sequences after heterologous hybridization using human exome. BMC Res Notes. 2022;15(1):282. doi:10.1186/s13104-022-06162-5.
Beaumont M, Roura E, Lambert W, Turni C, Michiels J, Chalvon-Demersay T. Selective nourishing of gut microbiota with amino acids: A novel prebiotic approach?. Front Nutr. 2022;9:1066898. doi:10.3389/fnut.2022.1066898.
Mohammadpanah M, Mehrgardi AAyatollahi, Gilbert H, et al. Genic and non-genic SNP contributions to additive and dominance genetic effects in purebred and crossbred pig traits. Sci Rep. 2022;12(1):3795. doi:10.1038/s41598-022-07767-3.
Hubert J-N, Demars J. Genomic Imprinting in the New Omics Era: A Model for Systems-Level Approaches. Front Genet. 2022;13:838534. doi:10.3389/fgene.2022.838534.
Consortium VGoats, Nijman IJ, Rosen BD, et al. Geographical contrasts of Y-chromosomal haplogroups from wild and domestic goats reveal ancient migrations and recent introgressions. Mol Ecol. 2022. doi:10.1111/mec.16579.
Kulak M, Komissarov A, Fillon V, Tsukanova K, Saifitdinova A, Galkina S. Genome organization of major tandem repeats and their specificity for heterochromatin of macro- and microchromosomes in Japanese quail. Genome. 2022;65(7):391-403. doi:10.1139/gen-2022-0012.

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