Publications

You can also find a list of our publications on HAL

2021

Allais-Bonnet A, Hintermann A, Deloche M-C, et al. Analysis of Polycerate Mutants Reveals the Evolutionary Co-option of HOXD1 for Horn Patterning in Bovidae. Mol Biol Evol. 2021. doi:10.1093/molbev/msab021.
Mariadassou M, Suez M, Sathyakumar S, et al. Unraveling the history of the genus Gallus through whole genome sequencing. Mol Phylogenet Evol. 2021;158:107044. doi:10.1016/j.ympev.2020.107044.
Tixier-Boichard M, Fabre S, Dhorne-Pollet S, et al. Tissue Resources for the Functional Annotation of Animal Genomes. Front Genet. 2021;12:666265. doi:10.3389/fgene.2021.666265.
Godon J-J, Bize A, Ngo H, et al. Bacterial Consumption of T4 Phages. Microorganisms. 2021;9(9). doi:10.3390/microorganisms9091852.
Abdollahi-Arpanahi R, Lourenco D, Legarra A, Misztal I. Dissecting genetic trends to understand breeding practices in livestock: a maternal pig line example. Genet Sel Evol. 2021;53(1):89. doi:10.1186/s12711-021-00683-6.
Lefebvre R, Larroque H, Barbey S, et al. Genome-wide association study for age at puberty and resumption of cyclicity in a crossbred dairy cattle population. J Dairy Sci. 2021. doi:10.3168/jds.2020-18228.
Robic A, Faraut T, Feve K, et al. Correlation Networks Provide New Insights into the Architecture of Testicular Steroid Pathways in Pigs. Genes (Basel). 2021;12(4). doi:10.3390/genes12040551.
Messad F, Louveau I, Renaudeau D, Gilbert H, Gondret F. Analysis of merged whole blood transcriptomic datasets to identify circulating molecular biomarkers of feed efficiency in growing pigs. BMC Genomics. 2021;22(1):501. doi:10.1186/s12864-021-07843-4.
Denoyelle L, de Villemereuil P, Boyer F, et al. Genetic Variations and Differential DNA Methylation to Face Contrasted Climates in Small Ruminants: An Analysis on Traditionally-Managed Sheep and Goats. Front Genet. 2021;12:745284. doi:10.3389/fgene.2021.745284.
Beaumont M, Mussard E, Barilly C, et al. Developmental Stage, Solid Food Introduction and Suckling Cessation Differentially Influence the Co-maturation of the Gut Microbiota and Intestinal Epithelium in Rabbits. J Nutr. 2021. doi:10.1093/jn/nxab411.
Bovo S, Schiavo G, Ribani A, et al. Describing variability in pig genes involved in coronavirus infections for a One Health perspective in conservation of animal genetic resources. Sci Rep. 2021;11(1):3359. doi:10.1038/s41598-021-82956-0.
Jehl F, Muret K, Bernard M, et al. Author Correction: An integrative atlas of chicken long non-coding genes and their annotations across 25 tissues. Sci Rep. 2021;11(1):9463. doi:10.1038/s41598-021-89158-8.
Jehl F, Degalez F, Bernard M, et al. RNA-Seq Data for Reliable SNP Detection and Genotype Calling: Interest for Coding Variant Characterization and -Regulation Analysis by Allele-Specific Expression in Livestock Species. Front Genet. 2021;12:655707. doi:10.3389/fgene.2021.655707.
Forneris NS, Garcia-Baccino CA, Cantet RJC, Vitezica ZG. Estimating inbreeding depression for growth and reproductive traits using pedigree and genomic methods in Argentinean Brangus cattle. J Anim Sci. 2021. doi:10.1093/jas/skab289.
Kraimi N, Lormant F, Calandreau L, et al. Microbiota and stress: a loop that impacts memory. Psychoneuroendocrinology. 2021;136:105594. doi:10.1016/j.psyneuen.2021.105594.
Raoul J, Elsen JM. The levels of artificial insemination and missing sire information make genomic selection not always beneficial in meat sheep. Animal. 2021:100040. doi:10.1016/j.animal.2020.100040.
Luise D, Le Sciellour M, Buchet A, et al. The fecal microbiota of piglets during weaning transition and its association with piglet growth across various farm environments. PLoS One. 2021;16(4):e0250655. doi:10.1371/journal.pone.0250655.
Brito LF, Bedere N, Douhard F, et al. Review: Genetic selection of high-yielding dairy cattle toward sustainable farming systems in a rapidly changing world. Animal. 2021:100292. doi:10.1016/j.animal.2021.100292.
Beaumont M, Lencina C, Painteaux L, et al. A mix of functional amino acids and grape polyphenols promotes the growth of piglets, modulates the gut microbiota in vivo and regulates epithelial homeostasis in intestinal organoids. Amino Acids. 2021. doi:10.1007/s00726-021-03082-9.
Douhard F, Douhard M, Gilbert H, Monget P, Gaillard J-M, Lemaître J-F. How much energetic trade-offs limit selection? Insights from livestock and related laboratory model species. Evol Appl. 2021;14(12):2726-2749. doi:10.1111/eva.13320.

2020

Solaymani S, Mehrgardi AAyatollahi, Esmailizadeh A, Tusell L, Momen M. Performance of pedigree and various forms of marker-derived relationship coefficients in genomic prediction and their correlations. J Anim Breed Genet. 2020. doi:10.1111/jbg.12467.
Morris KM, Hindle MM, Boitard S, et al. The Quail Genome: Insights into Social Behaviour, Seasonal Biology and Infectious Disease Response. BMC biology. 2020;18:14. doi:10.1186/s12915-020-0743-4.
Macedo FL, Christensen OF, Astruc J-M, Aguilar I, Masuda Y, Legarra A. Bias and accuracy of dairy sheep evaluations using BLUP and SSGBLUP with metafounders and unknown parent groups. Genet Sel Evol. 2020;52(1):47. doi:10.1186/s12711-020-00567-1.
Mondet F, Parejo M, Meixner MD, et al. Evaluation of Suppressed Mite Reproduction (SMR) Reveals Potential for Varroa Resistance in European Honey Bees ( L.). Insects. 2020;11(9). doi:10.3390/insects11090595.
Bovo S, Ribani A, Muñoz M, et al. Whole-genome sequencing of European autochthonous and commercial pig breeds allows the detection of signatures of selection for adaptation of genetic resources to different breeding and production systems. Genet Sel Evol. 2020;52(1):33. doi:10.1186/s12711-020-00553-7.
Beaumont M, Cauquil L, Bertide A, et al. Gut Microbiota-Derived Metabolite Signature in Suckling and Weaned Piglets. J Proteome Res. 2020. doi:10.1021/acs.jproteome.0c00745.
Litt J, Leterrier C, Savietto D, Fortun-Lamothe L. Influence of dietary strategy on progression of health and behaviour in mule ducks reared for fatty liver production. Animal. 2020;14(6):1258-1269. doi:10.1017/S1751731119003367.
Druet T, Legarra A. Theoretical and empirical comparisons of expected and realized relationships for the X-chromosome. Genet Sel Evol. 2020;52(1):50. doi:10.1186/s12711-020-00570-6.
Kasper C, Ribeiro D, de Almeida AM, Larzul C, Liaubet L, Muráni E. Omics Application in Animal Science-A Special Emphasis on Stress Response and Damaging Behaviour in Pigs. Genes (Basel). 2020;11(8). doi:10.3390/genes11080920.
Paës C, Fortun-Lamothe L, Coureaud G, et al. Insights into suckling rabbit feeding behaviour: acceptability of different creep feed presentations and attractiveness for sensory feed additives. Animal. 2020:1-9. doi:10.1017/S1751731120000038.

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