Publications
Found 33 results
Filters: Author is Vignal, Alain [Clear All Filters]
Identification of runs of homozygosity in Western honey bees () using whole-genome sequencing data. Ecol Evol. 2023;13(1):e9723. doi:10.1002/ece3.9723.
Complex population structure and haplotype patterns in the Western European honey bee from sequencing a large panel of haploid drones. Mol Ecol Resour. 2022. doi:10.1111/1755-0998.13665.
Reconstructing queen genotypes by pool sequencing colonies in eusocial insects: statistical methods and their application to honeybee. Mol Ecol Resour. 2022. doi:10.1111/1755-0998.13685.
Unraveling the history of the genus Gallus through whole genome sequencing. Mol Phylogenet Evol. 2021;158:107044. doi:10.1016/j.ympev.2020.107044.
Dense sampling of bird diversity increases power of comparative genomics. Nature. 2020;587(7833):252-257. doi:10.1038/s41586-020-2873-9.
Descriptive Analysis of the Varroa Non-Reproduction Trait in Honey Bee Colonies and Association with Other Traits Related to Varroa Resistance. Insects. 2020;11(8). doi:10.3390/insects11080492.
The Quail Genome: Insights into Social Behaviour, Seasonal Biology and Infectious Disease Response. BMC biology. 2020;18:14. doi:10.1186/s12915-020-0743-4.
A guinea fowl genome assembly provides new evidence on evolution following domestication and selection in galliformes. Molecular ecology resources. 2019;19:997—1014. doi:10.1111/1755-0998.13017.
Structure of the intergenic spacers in chicken ribosomal DNA. Genet Sel Evol. 2019;51(1):59. doi:10.1186/s12711-019-0501-7.
Two new structural mutations in the 5' region of the ASIP gene cause diluted feather color phenotypes in Japanese quail. Genet Sel Evol. 2019;51(1):12. doi:10.1186/s12711-019-0458-6.
Autosomal and Mitochondrial Adaptation Following Admixture: A Case Study on the Honeybees of Reunion Island. Genome Biol Evol. 2018;10(1):220-238. doi:10.1093/gbe/evx247.
Developing reduced SNP assays from whole-genome sequence data to estimate introgression in an organism with complex genetic patterns, the Iberian honeybee (). Evol Appl. 2018;11(8):1270-1282. doi:10.1111/eva.12623.
Deciphering mechanisms underlying the genetic variation of general production and liver quality traits in the overfed mule duck by pQTL analyses. Genet Sel Evol. 2017;49(1):38. doi:10.1186/s12711-017-0313-6.
Species difference in ANP32A underlies influenza A virus polymerase host restriction. Nature. 2016;529(7584):101-4. doi:10.1038/nature16474.
Whole-genome resequencing of honeybee drones to detect genomic selection in a population managed for royal jelly. Sci Rep. 2016;6:27168. doi:10.1038/srep27168.
A medium density genetic map and QTL for behavioral and production traits in Japanese quail. BMC Genomics. 2015;16:10. doi:10.1186/s12864-014-1210-9.
Mapping and genotypic analysis of the NK-lysin gene in chicken. Genet Sel Evol. 2014;46:43. doi:10.1186/1297-9686-46-43.
Transcriptome-wide investigation of genomic imprinting in chicken. Nucleic Acids Res. 2014;42(6):3768-82. doi:10.1093/nar/gkt1390.
The duck genome and transcriptome provide insight into an avian influenza virus reservoir species. Nat Genet. 2013;45(7):776-83. doi:10.1038/ng.2657.
Evidence of phenotypic and genetic relationships between sociality, emotional reactivity and production traits in Japanese quail. PLoS One. 2013;8(12):e82157. doi:10.1371/journal.pone.0082157.
Génomique des canards. INRA - Productions Animales. 2013;26(5):391-402.
A duck RH panel and its potential for assisting NGS genome assembly. BMC Genomics. 2012;13:513. doi:10.1186/1471-2164-13-513.
Fine mapping of complex traits in non-model species: using next generation sequencing and advanced intercross lines in Japanese quail. BMC Genomics. 2012;13:551. doi:10.1186/1471-2164-13-551.
Epilepsy caused by an abnormal alternative splicing with dosage effect of the SV2A gene in a chicken model. PLoS One. 2011;6(10):e26932. doi:10.1371/journal.pone.0026932.
Epilepsy caused by an abnormal alternative splicing with dosage effect of the SV2A gene in a chicken model. PloS one. 2011;6:e26932. doi:10.1371/journal.pone.0026932.