Publications

Found 26 results
Filters: Author is Legarra, Andres  [Clear All Filters]
2019
Aguilar I, Legarra A, Cardoso F, Masuda Y, Lourenco D, Misztal I. Frequentist p-values for large-scale-single step genome-wide association, with an application to birth weight in American Angus cattle. Genet Sel Evol. 2019;51(1):28. doi:10.1186/s12711-019-0469-3.
2018
Vitezica ZG, Reverter A, Herring W, Legarra A. Dominance and epistatic genetic variances for litter size in pigs using genomic models. Genet Sel Evol. 2018;50(1):71. doi:10.1186/s12711-018-0437-3.
Xiang T, Christensen OFredslund, Vitezica ZGladis, Legarra A. Genomic Model with Correlation Between Additive and Dominance Effects. Genetics. 2018;209(3):711-723. doi:10.1534/genetics.118.301015.
Varona L, Legarra A, Herring W, Vitezica ZG. Genomic selection models for directional dominance: an example for litter size in pigs. Genet Sel Evol. 2018;50(1):1. doi:10.1186/s12711-018-0374-1.
Legarra A, Ricard A, Varona L. GWAS by GBLUP: Single and Multimarker EMMAX and Bayes Factors, with an Example in Detection of a Major Gene for Horse Gait. G3 (Bethesda). 2018;8(7):2301-2308. doi:10.1534/g3.118.200336.
Varona L, Legarra A, Toro MA, Vitezica ZG. Non-additive Effects in Genomic Selection. Front Genet. 2018;9:78. doi:10.3389/fgene.2018.00078.
Legarra A, Reverter A. Semi-parametric estimates of population accuracy and bias of predictions of breeding values and future phenotypes using the LR method. Genet Sel Evol. 2018;50(1):53. doi:10.1186/s12711-018-0426-6.
2017
Fragomeni BO, Lourenco DAL, Masuda Y, Legarra A, Misztal I. Erratum to: Incorporation of causative quantitative trait nucleotides in single-step GBLUP. Genet Sel Evol. 2017;49(1):65. doi:10.1186/s12711-017-0341-2.
Perez-Enciso M, Forneris N, Campos Gde Los, Legarra A. Evaluating Sequence-Based Genomic Prediction with an Efficient New Simulator. Genetics. 2017;205(2):939-953. doi:10.1534/genetics.116.194878.
Colleau J-J, Palhière I, Rodríguez-Ramilo ST, Legarra A. A fast indirect method to compute functions of genomic relationships concerning genotyped and ungenotyped individuals, for diversity management. Genet Sel Evol. 2017;49(1):87. doi:10.1186/s12711-017-0363-9.
Baud A, Mulligan MK, Casale FPaolo, et al. Genetic Variation in the Social Environment Contributes to Health and Disease. PLoS Genet. 2017;13(1):e1006498. doi:10.1371/journal.pgen.1006498.
Fragomeni BO, Lourenco DAL, Masuda Y, Legarra A, Misztal I. Incorporation of causative quantitative trait nucleotides in single-step GBLUP. Genet Sel Evol. 2017;49(1):59. doi:10.1186/s12711-017-0335-0.
Forneris NS, Vitezica ZG, Legarra A, Perez-Enciso M. Influence of epistasis on response to genomic selection using complete sequence data. Genet Sel Evol. 2017;49(1):66. doi:10.1186/s12711-017-0340-3.
Pérez-Rodríguez P, Crossa J, Rutkoski J, et al. Single-Step Genomic and Pedigree Genotype × Environment Interaction Models for Predicting Wheat Lines in International Environments. Plant Genome. 2017;10(2). doi:10.3835/plantgenome2016.09.0089.
2016
Legarra A. Comparing estimates of genetic variance across different relationship models. Theor Popul Biol. 2016;107:26-30. doi:10.1016/j.tpb.2015.08.005.
Pocrnic I, Lourenco DAL, Masuda Y, Legarra A, Misztal I. The Dimensionality of Genomic Information and Its Effect on Genomic Prediction. Genetics. 2016;203(1):573-81. doi:10.1534/genetics.116.187013.
Vitezica ZG, Varona L, Elsen J-M, Misztal I, Herring W, Legarra A. Genomic BLUP including additive and dominant variation in purebreds and F1 crossbreds, with an application in pigs. Genet Sel Evol. 2016;48(1):6. doi:10.1186/s12711-016-0185-1.
Zhang X, Lourenco D, Aguilar I, Legarra A, Misztal I. Weighting Strategies for Single-Step Genomic BLUP: An Iterative Approach for Accurate Calculation of GEBV and GWAS. Front Genet. 2016;7:151. doi:10.3389/fgene.2016.00151.
2015
Lourenco DAL, Fragomeni BO, Tsuruta S, et al. Accuracy of estimated breeding values with genomic information on males, females, or both: an example on broiler chicken. Genet Sel Evol. 2015;47:56. doi:10.1186/s12711-015-0137-1.
Legarra A, Christensen OF, Vitezica ZG, Aguilar I, Misztal I. Ancestral Relationships Using Metafounders: Finite Ancestral Populations and Across Population Relationships. Genetics. 2015;200(2):455-68. doi:10.1534/genetics.115.177014.
Legarra A, Croiseau P, Sanchez MPierre, et al. A comparison of methods for whole-genome QTL mapping using dense markers in four livestock species. Genet Sel Evol. 2015;47:6. doi:10.1186/s12711-015-0087-7.
Christensen OF, Legarra A, Lund MS, Su G. Genetic evaluation for three-way crossbreeding. Genet Sel Evol. 2015;47:98. doi:10.1186/s12711-015-0177-6.
Legarra A, Vitezica ZG. Genetic evaluation with major genes and polygenic inheritance when some animals are not genotyped using gene content multiple-trait BLUP. Genet Sel Evol. 2015;47:89. doi:10.1186/s12711-015-0165-x.
Xiang T, Ma P, Ostersen T, Legarra A, Christensen OF. Imputation of genotypes in Danish purebred and two-way crossbred pigs using low-density panels. Genet Sel Evol. 2015;47:54. doi:10.1186/s12711-015-0134-4.
Forneris NS, Legarra A, Vitezica ZG, et al. Quality control of genotypes using heritability estimates of gene content at the marker. Genetics. 2015;199(3):675-81. doi:10.1534/genetics.114.173559.

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