Publications

Found 14 results
Filters: Keyword is Transcriptome  [Clear All Filters]
2024
Huau G, Liaubet L, Gourdine J-L, Riquet J, Renaudeau D. Multi-tissue metabolic and transcriptomic responses to a short-term heat stress in swine. BMC Genomics. 2024;25(1):99. doi:10.1186/s12864-024-09999-1.
2021
Messad F, Louveau I, Renaudeau D, Gilbert H, Gondret F. Analysis of merged whole blood transcriptomic datasets to identify circulating molecular biomarkers of feed efficiency in growing pigs. BMC Genomics. 2021;22(1):501. doi:10.1186/s12864-021-07843-4.
2015
Foissac S, Sammeth M. Analysis of alternative splicing events in custom gene datasets by AStalavista. Methods Mol Biol. 2015;1269:379-92. doi:10.1007/978-1-4939-2291-8_24.
Bonhomme M, Boitard S, San Clemente H, Dumas B, Young N, Jacquet C. Genomic Signature of Selective Sweeps Illuminates Adaptation of Medicago truncatula to Root-Associated Microorganisms. Mol Biol Evol. 2015;32(8):2097-110. doi:10.1093/molbev/msv092.
2014
Jiang Y, Xie M, Chen W, et al. The sheep genome illuminates biology of the rumen and lipid metabolism. Science. 2014;344(6188):1168-73. doi:10.1126/science.1252806.
Oster M, Muráni E, Ponsuksili S, et al. Transcriptional responses of PBMC in psychosocially stressed animals indicate an alerting of the immune system in female but not in castrated male pigs. BMC Genomics. 2014;15:967. doi:10.1186/1471-2164-15-967.
Frésard L, Leroux S, Servin B, et al. Transcriptome-wide investigation of genomic imprinting in chicken. Nucleic Acids Res. 2014;42(6):3768-82. doi:10.1093/nar/gkt1390.
2013
Huang Y, Li Y, Burt DW, et al. The duck genome and transcriptome provide insight into an avian influenza virus reservoir species. Nat Genet. 2013;45(7):776-83. doi:10.1038/ng.2657.
Bonnet A, Cabau C, Bouchez O, et al. An overview of gene expression dynamics during early ovarian folliculogenesis: specificity of follicular compartments and bi-directional dialog. BMC Genomics. 2013;14:904. doi:10.1186/1471-2164-14-904.
2012
Djebali-Quelen S, Lagarde J, Kapranov P, et al. Evidence for transcript networks composed of chimeric RNAs in human cells. PLoS One. 2012;7(1):e28213. doi:10.1371/journal.pone.0028213.
Frésard L, Leroux S, Dehais P, et al. Fine mapping of complex traits in non-model species: using next generation sequencing and advanced intercross lines in Japanese quail. BMC Genomics. 2012;13:551. doi:10.1186/1471-2164-13-551.
Djebali-Quelen S, Davis CA, Merkel A, et al. Landscape of transcription in human cells. Nature. 2012;489(7414):101-8. doi:10.1038/nature11233.
2011
Toufeer M, Bonnefont CMD, Foulon E, et al. Gene expression profiling of dendritic cells reveals important mechanisms associated with predisposition to Staphylococcus infections. PLoS One. 2011;6(8):e22147. doi:10.1371/journal.pone.0022147.
Liaubet L, Lobjois V, Faraut T, et al. Genetic variability of transcript abundance in pig peri-mortem skeletal muscle: eQTL localized genes involved in stress response, cell death, muscle disorders and metabolism. BMC Genomics. 2011;12:548. doi:10.1186/1471-2164-12-548.