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2021
Bovo S, Schiavo G, Ribani A, et al. Describing variability in pig genes involved in coronavirus infections for a One Health perspective in conservation of animal genetic resources. Sci Rep. 2021;11(1):3359. doi:10.1038/s41598-021-82956-0.
2020
Beaumont M, Blachier F. Amino Acids in Intestinal Physiology and Health. Adv Exp Med Biol. 2020;1265:1-20. doi:10.1007/978-3-030-45328-2_1.
2017
Ferlay A, Bernard L, Meynadier A, Malpuech-Brugère C. Production of trans and conjugated fatty acids in dairy ruminants and their putative effects on human health: A review. Biochimie. 2017;141:107-120. doi:10.1016/j.biochi.2017.08.006.
2016
Mazet O, Rodríguez W, Grusea S, Boitard S, Chikhi L. On the importance of being structured: instantaneous coalescence rates and human evolution--lessons for ancestral population size inference?. Heredity (Edinb). 2016;116(4):362-71. doi:10.1038/hdy.2015.104.
Long JS, Giotis ES, Moncorgé O, et al. Species difference in ANP32A underlies influenza A virus polymerase host restriction. Nature. 2016;529(7584):101-4. doi:10.1038/nature16474.
2015
Foissac S, Sammeth M. Analysis of alternative splicing events in custom gene datasets by AStalavista. Methods Mol Biol. 2015;1269:379-92. doi:10.1007/978-1-4939-2291-8_24.
Estienne A, Pierre A, di Clemente N, et al. Anti-Müllerian hormone regulation by the bone morphogenetic proteins in the sheep ovary: deciphering a direct regulatory pathway. Endocrinology. 2015;156(1):301-13. doi:10.1210/en.2014-1551.
2014
Demars J, Shmela MEnnuri, Khan AWaheed, et al. Genetic variants within the second intron of the KCNQ1 gene affect CTCF binding and confer a risk of Beckwith-Wiedemann syndrome upon maternal transmission. J Med Genet. 2014;51(8):502-11. doi:10.1136/jmedgenet-2014-102368.
Hazard D, Moreno C, Foulquié D, et al. Identification of QTLs for behavioral reactivity to social separation and humans in sheep using the OvineSNP50 BeadChip. BMC Genomics. 2014;15:778. doi:10.1186/1471-2164-15-778.
Robic A, Faraut T, Prunier A. Pathways and genes involved in steroid hormone metabolism in male pigs: a review and update. J Steroid Biochem Mol Biol. 2014;140:44-55. doi:10.1016/j.jsbmb.2013.11.001.
2013
David I, Elsen J-M, Concordet D. CLIP Test: a new fast, simple and powerful method to distinguish between linked or pleiotropic quantitative trait loci in linkage disequilibria analysis. Heredity (Edinb). 2013;110(3):232-8. doi:10.1038/hdy.2012.70.
Bonnet A, Cabau C, Bouchez O, et al. An overview of gene expression dynamics during early ovarian folliculogenesis: specificity of follicular compartments and bi-directional dialog. BMC Genomics. 2013;14:904. doi:10.1186/1471-2164-14-904.
Villa-Vialaneix N, Liaubet L, Laurent T, Cherel P, Gamot A, San Cristobal M. The structure of a gene co-expression network reveals biological functions underlying eQTLs. PLoS One. 2013;8(4):e60045. doi:10.1371/journal.pone.0060045.
2012
Demars J, Gicquel C. Epigenetic and genetic disturbance of the imprinted 11p15 region in Beckwith-Wiedemann and Silver-Russell syndromes. Clin Genet. 2012;81(4):350-61. doi:10.1111/j.1399-0004.2011.01822.x.
Djebali-Quelen S, Lagarde J, Kapranov P, et al. Evidence for transcript networks composed of chimeric RNAs in human cells. PLoS One. 2012;7(1):e28213. doi:10.1371/journal.pone.0028213.
An integrated encyclopedia of DNA elements in the human genome. Nature. 2012;489(7414):57-74. doi:10.1038/nature11247.
Djebali-Quelen S, Davis CA, Merkel A, et al. Landscape of transcription in human cells. Nature. 2012;489(7414):101-8. doi:10.1038/nature11233.
2011
Demars J, Le Bouc Y, El-Osta A, Gicquel C. Epigenetic and genetic mechanisms of abnormal 11p15 genomic imprinting in Silver-Russell and Beckwith-Wiedemann syndromes. Curr Med Chem. 2011;18(12):1740-50.
Douaud M, Feve K, Pituello F, et al. Epilepsy caused by an abnormal alternative splicing with dosage effect of the SV2A gene in a chicken model. PloS one. 2011;6:e26932. doi:10.1371/journal.pone.0026932.
Douaud M, Feve K, Pituello F, et al. Epilepsy caused by an abnormal alternative splicing with dosage effect of the SV2A gene in a chicken model. PLoS One. 2011;6(10):e26932. doi:10.1371/journal.pone.0026932.
Mormède P, Foury A, Barat P, et al. Molecular genetics of hypothalamic-pituitary-adrenal axis activity and function. Ann N Y Acad Sci. 2011;1220:127-36. doi:10.1111/j.1749-6632.2010.05902.x.
Demars J, Rossignol S, Netchine I, et al. New insights into the pathogenesis of Beckwith-Wiedemann and Silver-Russell syndromes: contribution of small copy number variations to 11p15 imprinting defects. Hum Mutat. 2011;32(10):1171-82. doi:10.1002/humu.21558.
Le Cao KA, Boitard S, Besse P. Sparse PLS discriminant analysis: biologically relevant feature selection and graphical displays for multiclass problems. BMC bioinformatics. 2011;12:253. doi:10.1186/1471-2105-12-253.
2010
Boitard S, Mangin B, Aza\"ıs J-M. Asymptotic distribution of the "orthogonal" quantitative transmission disequilibrium test in a structured population: exact formula. Statistical applications in genetics and molecular biology. 2010;9:Article 11. doi:10.1534/genetics.108.100032.
Ozsolak F, Kapranov P, Foissac S, et al. Comprehensive polyadenylation site maps in yeast and human reveal pervasive alternative polyadenylation. Cell. 2010;143(6):1018-29. doi:10.1016/j.cell.2010.11.020.

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