Publications

Found 14 results
Filters: Author is Djebali, Sarah  [Clear All Filters]
2023
Hoellinger T, Mestre C, Aschard H, et al. Enhancer/gene relationships: Need for more reliable genome-wide reference sets. Front Bioinform. 2023;3:1092853. doi:10.3389/fbinf.2023.1092853.
2021
Jehl F, Muret K, Bernard M, et al. Author Correction: An integrative atlas of chicken long non-coding genes and their annotations across 25 tissues. Sci Rep. 2021;11(1):9463. doi:10.1038/s41598-021-89158-8.
Robic A, Faraut T, Feve K, et al. Correlation Networks Provide New Insights into the Architecture of Testicular Steroid Pathways in Pigs. Genes (Basel). 2021;12(4). doi:10.3390/genes12040551.
Jehl F, Degalez F, Bernard M, et al. RNA-Seq Data for Reliable SNP Detection and Genotype Calling: Interest for Coding Variant Characterization and -Regulation Analysis by Allele-Specific Expression in Livestock Species. Front Genet. 2021;12:655707. doi:10.3389/fgene.2021.655707.
2020
Jehl F, Muret K, Bernard M, et al. An integrative atlas of chicken long non-coding genes and their annotations across 25 tissues. Sci Rep. 2020;10(1):20457. doi:10.1038/s41598-020-77586-x.
2019
Robic A, Faraut T, Djebali S, et al. Analysis of pig transcriptomes suggests a global regulation mechanism enabling temporary bursts of circular RNAs. RNA Biol. 2019:1-15. doi:10.1080/15476286.2019.1621621.
2017
Hon C-C, Ramilowski JA, Harshbarger J, et al. An atlas of human long non-coding RNAs with accurate 5' ends. Nature. 2017;543(7644):199-204. doi:10.1038/nature21374.
Djebali S, Wucher V, Foissac S, Hitte C, Corre E, Derrien T. Bioinformatics Pipeline for Transcriptome Sequencing Analysis. Methods Mol Biol. 2017;1468:201-19. doi:10.1007/978-1-4939-4035-6_14.
Djebali S, Wucher V, Foissac S, Hitte C, Corre E, Derrien T. Erratum to: Bioinformatics Pipeline for Transcriptome Sequencing Analysis. Methods Mol Biol. 2017;1468:E1. doi:10.1007/978-1-4939-4035-6_17.
Muret K, Klopp C, Wucher V, et al. Long noncoding RNA repertoire in chicken liver and adipose tissue. Genet Sel Evol. 2017;49(1):6. doi:10.1186/s12711-016-0275-0.
2016
Breschi A, Djebali-Quelen S, Gillis J, et al. Gene-specific patterns of expression variation across organs and species. Genome Biol. 2016;17(1):151. doi:10.1186/s13059-016-1008-y.
2012
Djebali-Quelen S, Lagarde J, Kapranov P, et al. Evidence for transcript networks composed of chimeric RNAs in human cells. PLoS One. 2012;7(1):e28213. doi:10.1371/journal.pone.0028213.
Djebali-Quelen S, Davis CA, Merkel A, et al. Landscape of transcription in human cells. Nature. 2012;489(7414):101-8. doi:10.1038/nature11233.
2008
Djebali-Quelen S, Kapranov P, Foissac S, et al. Efficient targeted transcript discovery via array-based normalization of RACE libraries. Nat Methods. 2008;5(7):629-35. doi:10.1038/nmeth.1216.