Publications
Found 45 results
Filters: Keyword is Genotype [Clear All Filters]
AmelHap: Leveraging drone whole-genome sequence data to create a honey bee HapMap. Sci Data. 2023;10(1):198. doi:10.1038/s41597-023-02097-z.
. HLA-F transcriptional and protein differential expression according to its genetic polymorphisms. HLA. 2023;102(5):578-589. doi:10.1111/tan.15087.
. A pangenome graph reference of 30 chicken genomes allows genotyping of large and complex structural variants. BMC Biol. 2023;21(1):267. doi:10.1186/s12915-023-01758-0.
Reliabilities of estimated breeding values in models with metafounders. Genet Sel Evol. 2023;55(1):6. doi:10.1186/s12711-023-00778-2.
. Restriction site-associated DNA sequencing technologies as an alternative to low-density SNP chips for genomic selection: a simulation study in layer chickens. BMC Genomics. 2023;24(1):271. doi:10.1186/s12864-023-09321-5.
Whole genome sequencing reveals signals of adaptive admixture in Creole cattle. Sci Rep. 2023;13(1):12155. doi:10.1038/s41598-023-38774-7.
Accounting for overlapping annotations in genomic prediction models of complex traits. BMC Bioinformatics. 2022;23(1):365. doi:10.1186/s12859-022-04914-5.
. Genomic evaluation and genome-wide association studies for total number of teats in a combined American and Danish Yorkshire pig populations selected in China. J Anim Sci. 2022;100(7). doi:10.1093/jas/skac174.
Genomic Prediction Methods Accounting for Nonadditive Genetic Effects. Methods Mol Biol. 2022;2467:219-243. doi:10.1007/978-1-0716-2205-6_8.
. Genomic Prediction of Complex Traits, Principles, Overview of Factors Affecting the Reliability of Genomic Prediction, and Algebra of the Reliability. Methods Mol Biol. 2022;2467:45-76. doi:10.1007/978-1-0716-2205-6_2.
. Genotyping data of French wild boar populations using porcine genome-wide genotyping array. BMC Res Notes. 2022;15(1):170. doi:10.1186/s13104-022-06052-w.
Quantifying heritability and estimating evolutionary potential in the wild when individuals that share genes also share environments. J Anim Ecol. 2022;91(6):1239-1250. doi:10.1111/1365-2656.13677.
Dissecting genetic trends to understand breeding practices in livestock: a maternal pig line example. Genet Sel Evol. 2021;53(1):89. doi:10.1186/s12711-021-00683-6.
. Estimating dominance genetic variances for growth traits in American Angus males using genomic models. J Anim Sci. 2020;98(1). doi:10.1093/jas/skz384.
. Whole-genome sequencing of European autochthonous and commercial pig breeds allows the detection of signatures of selection for adaptation of genetic resources to different breeding and production systems. Genet Sel Evol. 2020;52(1):33. doi:10.1186/s12711-020-00553-7.
Dissecting total genetic variance into additive and dominance components of purebred and crossbred pig traits. Animal. 2019;13(11):2429-2439. doi:10.1017/S1751731119001046.
. Genotype by environment interactions for performance and thermoregulation responses in growing pigs1,2. J Anim Sci. 2019;97(9):3699-3713. doi:10.1093/jas/skz245.
Optimal mating strategies to manage a heterozygous advantage major gene in sheep. Animal. 2018;12(3):454-463. doi:10.1017/S1751731117001835.
. Estimates of the actual relationship between half-sibs in a pig population. J Anim Breed Genet. 2017;134(2):109-118. doi:10.1111/jbg.12236.
Goat domestication and breeding: a jigsaw of historical, biological and molecular data with missing pieces. Anim Genet. 2017;48(6):631-644. doi:10.1111/age.12598.
. Single-Step Genomic and Pedigree Genotype × Environment Interaction Models for Predicting Wheat Lines in International Environments. Plant Genome. 2017;10(2). doi:10.3835/plantgenome2016.09.0089.
Technical note: Avoiding the direct inversion of the numerator relationship matrix for genotyped animals in single-step genomic best linear unbiased prediction solved with the preconditioned conjugate gradient. J Anim Sci. 2017;95(1):49-52. doi:10.2527/jas.2016.0699.
Anti-Müllerian hormone regulation by the bone morphogenetic proteins in the sheep ovary: deciphering a direct regulatory pathway. Endocrinology. 2015;156(1):301-13. doi:10.1210/en.2014-1551.
Does heterozygosity at the DMRT3 gene make French trotters better racers?. Genet Sel Evol. 2015;47:10. doi:10.1186/s12711-015-0095-7.
. A joint analysis to identify loci underlying variation in nematode resistance in three European sheep populations. J Anim Breed Genet. 2014;131(6):426-36. doi:10.1111/jbg.12071.